Anyone created any kind of molecular visualization software in Ruby?
Something like PyMol, but much simpler (I only need ball & stick, don't need
any protein visualization stuff)... scriptability (in Ruby, of course) would
be nice as would the ability to output in postscript or jpeg.
Phil
I've used a combination of Ruby and gnuplot for protein visualization.
Maybe it'll do the trick for your molecules. But, no, we don't have
anything as nice as PyMol unfortunately.
Dan
On 9/26/05, Phil Tomson <ptkwt@aracnet.com> wrote:
Anyone created any kind of molecular visualization software in Ruby?
Something like PyMol, but much simpler (I only need ball & stick, don't need
any protein visualization stuff)... scriptability (in Ruby, of course) would
be nice as would the ability to output in postscript or jpeg.Phil
In article <a65ae5c905092811183458c108@mail.gmail.com>,
I've used a combination of Ruby and gnuplot for protein visualization.
Maybe it'll do the trick for your molecules. But, no, we don't have
anything as nice as PyMol unfortunately.Dan
Anything you can share?
I really don't need anything nearly as complex as PyMol - just ball&Stick.
Phil
Daniel Amelang <daniel.amelang@gmail.com> wrote:
On 9/26/05, Phil Tomson <ptkwt@aracnet.com> wrote:
Anyone created any kind of molecular visualization software in Ruby?
Something like PyMol, but much simpler (I only need ball & stick, don't n=eed
any protein visualization stuff)... scriptability (in Ruby, of course) wo=
uld
be nice as would the ability to output in postscript or jpeg.
Phil
I'll contact you off-list.
On 9/28/05, Phil Tomson <ptkwt@aracnet.com> wrote:
In article <a65ae5c905092811183458c108@mail.gmail.com>,
Daniel Amelang <daniel.amelang@gmail.com> wrote:
>I've used a combination of Ruby and gnuplot for protein visualization.
>Maybe it'll do the trick for your molecules. But, no, we don't have
>anything as nice as PyMol unfortunately.
>
>DanAnything you can share?
I really don't need anything nearly as complex as PyMol - just ball&Stick.Phil
>
>On 9/26/05, Phil Tomson <ptkwt@aracnet.com> wrote:
>> Anyone created any kind of molecular visualization software in Ruby?
>> Something like PyMol, but much simpler (I only need ball & stick, don't n=
>eed
>> any protein visualization stuff)... scriptability (in Ruby, of course) wo=
>uld
>> be nice as would the ability to output in postscript or jpeg.
>>
>>
>>
>> Phil
>>
>>
>
>
I'll contact you off-list.
any chance i could convice you to post it sciruby?
In article <a65ae5c905092811183458c108@mail.gmail.com>,
I've used a combination of Ruby and gnuplot for protein visualization.
Maybe it'll do the trick for your molecules. But, no, we don't have
anything as nice as PyMol unfortunately.Dan
Anything you can share?
I really don't need anything nearly as complex as PyMol - just ball&Stick.Phil
Anyone created any kind of molecular visualization software in Ruby?
Something like PyMol, but much simpler (I only need ball & stick, don't n=eed
any protein visualization stuff)... scriptability (in Ruby, of course) wo=
uld
be nice as would the ability to output in postscript or jpeg.
Phil
-a
On Thu, 29 Sep 2005, Daniel Amelang wrote:
Daniel Amelang <daniel.amelang@gmail.com> wrote:
On 9/26/05, Phil Tomson <ptkwt@aracnet.com> wrote:
email :: ara [dot] t [dot] howard [at] noaa [dot] gov
phone :: 303.497.6469
Your life dwells amoung the causes of death
Like a lamp standing in a strong breeze. --Nagarjuna
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