-------- Original-Nachricht --------
Datum: Thu, 15 May 2008 14:12:37 +0900
Von: Phil Rhoades <phil@pricom.com.au>
An: ruby-talk@ruby-lang.org
Betreff: Re: Any population geneticists out there? interested in a Ruby SIG?
Joel VanderWerf wrote:
> Phil Rhoades wrote:
>> People,
>>
>> I have previously done all my simulation work in C/C++ (as a C++
>> exercise really) but it would be nice to do further work in Ruby
>> (although I am concerned about performance for big simulations - might
>> need a C interface?). Using Ruby for large scale redevelopments is
>> probably not going to be possible until I get the thesis finished but
it
>> would be good if I had some idea if there are other people doing things
>> of interest who are interested in chatting about stuff.
>
> I'm very interested in simulation with ruby (and C), though probably
> using very different constructs than you are. What sorts of models do
> you use? Is any part of it continuous dynamics, ODEs?
>
DNA, specifically microsatellite replication, generations of organisms,
mutation etc - modelling thratened populations. So they are Individual
Based Models rather than say a Differential Equation Model.
Regards,
Phil.
--
Philip Rhoades
Pricom Pty Limited (ACN 003 252 275 ABN 91 003 252 275)
GPO Box 3411
Sydney NSW 2001
Australia
E-mail: phil@pricom.com.au
Philip,
if you have individual problems of many different kinds, maybe you get
the best input by posting on a general list ... eg, this one.
There is some software for genetic algorithms in Ruby, like:
http://gga4r.rubyforge.org/
or constraint programming,
http://conssolv.rubyforge.org/
http://gecoder.rubyforge.org/
A good place to look for Ruby and science in general is :
http://sciruby.codeforpeople.com/
If you want to use C/C++ code from Ruby, you might be interested in following this project:
http://rubyforge.org/projects/rbplusplus/
Best regards,
Axel
···
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